Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 AL691432.2-201ENST00000607222 2038 ntBASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 AL671277.2-201ENST00000458060 996 ntBASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 AC140113.3-201ENST00000605663 199 ntBASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
TRIM71Q2Q1W2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM71Q2Q1W2 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 IER3-202ENST00000376377 1350 ntBASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 KRT18P56-201ENST00000507275 550 ntBASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM71Q2Q1W2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 AC005332.1-201ENST00000577698 1310 ntBASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 AC116407.4-201ENST00000623319 1061 ntBASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 AL512408.1-201ENST00000569378 2000 ntBASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM71Q2Q1W2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM71Q2Q1W2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM71Q2Q1W2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM71Q2Q1W2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM71Q2Q1W2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.14■□□□□ 0.97
TRIM71Q2Q1W2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM71Q2Q1W2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM71Q2Q1W2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM71Q2Q1W2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms