Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH17Q12864 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH17Q12864 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH17Q12864 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH17Q12864 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH17Q12864 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH17Q12864 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH17Q12864 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH17Q12864 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH17Q12864 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDH17Q12864 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 LINC01465-201ENST00000408887 1940 ntBASIC19.57■□□□□ 0.72
CDH17Q12864 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH17Q12864 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH17Q12864 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 KRT17P3-201ENST00000420566 1262 ntBASIC19.57■□□□□ 0.72
CDH17Q12864 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 AC026366.1-201ENST00000488803 879 ntBASIC19.57■□□□□ 0.72
CDH17Q12864 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
CDH17Q12864 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH17Q12864 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH17Q12864 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH17Q12864 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH17Q12864 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH17Q12864 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH17Q12864 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH17Q12864 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH17Q12864 TEX21P-204ENST00000641479 1693 ntBASIC19.56■□□□□ 0.72
CDH17Q12864 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 AC141586.3-201ENST00000562166 1838 ntBASIC19.56■□□□□ 0.72
CDH17Q12864 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH17Q12864 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDH17Q12864 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
CDH17Q12864 KRT18P6-201ENST00000555540 1265 ntBASIC19.56■□□□□ 0.72
CDH17Q12864 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.56■□□□□ 0.72
CDH17Q12864 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH17Q12864 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH17Q12864 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH17Q12864 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH17Q12864 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH17Q12864 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH17Q12864 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH17Q12864 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CDH17Q12864 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH17Q12864 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 AC069544.1-201ENST00000609399 999 ntBASIC19.55■□□□□ 0.72
CDH17Q12864 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH17Q12864 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH17Q12864 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH17Q12864 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDH17Q12864 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms