Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 TFP1-202ENST00000475455 1573 ntBASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 GCSHP5-201ENST00000443090 522 ntBASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 AL359736.2-201ENST00000621992 437 ntBASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RASGEF1BQ0VAM2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.58■□□□□ 0.41
RASGEF1BQ0VAM2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.58■□□□□ 0.41
RASGEF1BQ0VAM2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.58■□□□□ 0.41
RASGEF1BQ0VAM2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RASGEF1BQ0VAM2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RASGEF1BQ0VAM2 BCL2-203ENST00000589955 5011 ntBASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 AC124016.1-201ENST00000609552 612 ntBASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RASGEF1BQ0VAM2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 AP006587.1-201ENST00000534129 1502 ntBASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 NBPF21P-201ENST00000425093 1451 ntBASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 AC133681.1-201ENST00000465482 601 ntBASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 AC110285.5-201ENST00000611501 352 ntBASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.57■□□□□ 0.4
RASGEF1BQ0VAM2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RASGEF1BQ0VAM2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms