Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H3AP68431 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H3AP68431 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ESRRAP1-201ENST00000400596 1257 ntBASIC16.93■□□□□ 0.3
HIST1H3AP68431 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 AC141586.3-201ENST00000562166 1838 ntBASIC16.93■□□□□ 0.3
HIST1H3AP68431 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H3AP68431 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H3AP68431 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 TEX21P-204ENST00000641479 1693 ntBASIC16.92■□□□□ 0.3
HIST1H3AP68431 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
HIST1H3AP68431 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H3AP68431 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIST1H3AP68431 AC138932.1-201ENST00000534164 6830 ntBASIC16.92■□□□□ 0.3
HIST1H3AP68431 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 C1QL1P1-201ENST00000568105 661 ntBASIC16.91■□□□□ 0.3
HIST1H3AP68431 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms