Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
YBX1P67809 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
YBX1P67809 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
YBX1P67809 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.91■□□□□ 0.62
YBX1P67809 PRKY-204ENST00000533551 1019 ntBASIC18.91■□□□□ 0.62
YBX1P67809 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.9■□□□□ 0.62
YBX1P67809 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
YBX1P67809 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
YBX1P67809 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.9■□□□□ 0.62
YBX1P67809 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
YBX1P67809 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.9■□□□□ 0.62
YBX1P67809 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.9■□□□□ 0.62
YBX1P67809 AC133681.1-201ENST00000465482 601 ntBASIC18.9■□□□□ 0.62
YBX1P67809 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
YBX1P67809 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.9■□□□□ 0.62
YBX1P67809 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.9■□□□□ 0.62
YBX1P67809 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.9■□□□□ 0.62
YBX1P67809 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YBX1P67809 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
YBX1P67809 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
YBX1P67809 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.89■□□□□ 0.61
YBX1P67809 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
YBX1P67809 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.89■□□□□ 0.61
YBX1P67809 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.89■□□□□ 0.61
YBX1P67809 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.89■□□□□ 0.61
YBX1P67809 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
YBX1P67809 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
YBX1P67809 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
YBX1P67809 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.89■□□□□ 0.61
YBX1P67809 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
YBX1P67809 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
YBX1P67809 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YBX1P67809 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.88■□□□□ 0.61
YBX1P67809 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
YBX1P67809 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.88■□□□□ 0.61
YBX1P67809 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.88■□□□□ 0.61
YBX1P67809 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.88■□□□□ 0.61
YBX1P67809 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 AC110285.5-201ENST00000611501 352 ntBASIC18.88■□□□□ 0.61
YBX1P67809 FAM197Y4-202ENST00000622692 608 ntBASIC18.88■□□□□ 0.61
YBX1P67809 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.88■□□□□ 0.61
YBX1P67809 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.88■□□□□ 0.61
YBX1P67809 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms