Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
SRP54P61011 AC011298.2-201ENST00000617989 482 ntBASIC19.12■□□□□ 0.65
SRP54P61011 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.12■□□□□ 0.65
SRP54P61011 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.12■□□□□ 0.65
SRP54P61011 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.12■□□□□ 0.65
SRP54P61011 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP54P61011 AC099778.1-201ENST00000568593 1911 ntBASIC19.12■□□□□ 0.65
SRP54P61011 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SRP54P61011 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SRP54P61011 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.11■□□□□ 0.65
SRP54P61011 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 CRYGFP-201ENST00000418459 633 ntBASIC19.11■□□□□ 0.65
SRP54P61011 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRP54P61011 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 AC005363.2-201ENST00000618631 242 ntBASIC19.11■□□□□ 0.65
SRP54P61011 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.11■□□□□ 0.65
SRP54P61011 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SRP54P61011 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SRP54P61011 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP54P61011 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SRP54P61011 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
SRP54P61011 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 KRT18P22-201ENST00000402024 1347 ntBASIC19.1■□□□□ 0.65
SRP54P61011 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRP54P61011 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
SRP54P61011 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 MIR1224-201ENST00000408193 85 ntBASIC19.1■□□□□ 0.65
SRP54P61011 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.1■□□□□ 0.65
SRP54P61011 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.1■□□□□ 0.65
SRP54P61011 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.1■□□□□ 0.65
SRP54P61011 SLC25A1P4-201ENST00000567977 778 ntBASIC19.1■□□□□ 0.65
SRP54P61011 AP000692.2-201ENST00000608391 879 ntBASIC19.1■□□□□ 0.65
SRP54P61011 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.1■□□□□ 0.65
SRP54P61011 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP54P61011 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP54P61011 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.09■□□□□ 0.65
SRP54P61011 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRP54P61011 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.09■□□□□ 0.65
SRP54P61011 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.09■□□□□ 0.65
SRP54P61011 AC008040.2-201ENST00000461049 708 ntBASIC19.09■□□□□ 0.65
SRP54P61011 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.09■□□□□ 0.65
SRP54P61011 C2orf69P3-201ENST00000565542 1120 ntBASIC19.09■□□□□ 0.65
SRP54P61011 AL160286.2-201ENST00000567150 934 ntBASIC19.09■□□□□ 0.65
SRP54P61011 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRP54P61011 LINC01006-201ENST00000333319 2292 ntBASIC19.09■□□□□ 0.65
SRP54P61011 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRP54P61011 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SRP54P61011 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP54P61011 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SRP54P61011 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.09■□□□□ 0.65
SRP54P61011 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP54P61011 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
SRP54P61011 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP54P61011 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SRP54P61011 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP54P61011 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRP54P61011 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SRP54P61011 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP54P61011 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms