Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN2P57739 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN2P57739 FAM87A-204ENST00000613235 858 ntBASIC19.16■□□□□ 0.66
CLDN2P57739 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 AC096733.2-201ENST00000609937 1394 ntBASIC19.16■□□□□ 0.66
CLDN2P57739 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN2P57739 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN2P57739 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN2P57739 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 ARMC10P1-201ENST00000313754 855 ntBASIC19.15■□□□□ 0.66
CLDN2P57739 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN2P57739 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN2P57739 ATP5G1P1-201ENST00000448724 379 ntBASIC19.15■□□□□ 0.66
CLDN2P57739 AC104076.2-201ENST00000448912 469 ntBASIC19.15■□□□□ 0.66
CLDN2P57739 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 AC128688.1-201ENST00000487626 519 ntBASIC19.15■□□□□ 0.66
CLDN2P57739 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN2P57739 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN2P57739 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN2P57739 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN2P57739 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN2P57739 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN2P57739 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN2P57739 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CLDN2P57739 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN2P57739 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN2P57739 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN2P57739 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN2P57739 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN2P57739 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN2P57739 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN2P57739 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN2P57739 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN2P57739 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN2P57739 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CLDN2P57739 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN2P57739 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN2P57739 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLDN2P57739 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN2P57739 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CLDN2P57739 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 AL590326.2-201ENST00000625139 305 ntBASIC19.13■□□□□ 0.65
CLDN2P57739 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN2P57739 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN2P57739 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN2P57739 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN2P57739 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN2P57739 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 TCF3P1-201ENST00000423021 1937 ntBASIC19.12■□□□□ 0.65
CLDN2P57739 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN2P57739 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN2P57739 KRT8P41-201ENST00000533985 1514 ntBASIC19.12■□□□□ 0.65
CLDN2P57739 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN2P57739 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms