Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAV3P56539 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.26■□□□□ 0.35
CAV3P56539 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 AC013268.1-206ENST00000638368 961 ntBASIC17.26■□□□□ 0.35
CAV3P56539 AC112229.1-201ENST00000639295 961 ntBASIC17.26■□□□□ 0.35
CAV3P56539 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CAV3P56539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.26■□□□□ 0.35
CAV3P56539 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CAV3P56539 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.26■□□□□ 0.35
CAV3P56539 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAV3P56539 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 AC135050.7-201ENST00000624508 2218 ntBASIC17.25■□□□□ 0.35
CAV3P56539 AC006333.2-201ENST00000607957 2099 ntBASIC17.25■□□□□ 0.35
CAV3P56539 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CAV3P56539 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CAV3P56539 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CAV3P56539 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CAV3P56539 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CAV3P56539 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.25■□□□□ 0.35
CAV3P56539 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAV3P56539 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
CAV3P56539 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 AC004911.1-201ENST00000416316 871 ntBASIC17.24■□□□□ 0.35
CAV3P56539 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.24■□□□□ 0.35
CAV3P56539 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 AC007322.4-201ENST00000509611 723 ntBASIC17.24■□□□□ 0.35
CAV3P56539 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 DUX4L16-201ENST00000555130 1264 ntBASIC17.24■□□□□ 0.35
CAV3P56539 AC231657.2-201ENST00000624556 255 ntBASIC17.24■□□□□ 0.35
CAV3P56539 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAV3P56539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.24■□□□□ 0.35
CAV3P56539 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.24■□□□□ 0.35
CAV3P56539 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CAV3P56539 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.23■□□□□ 0.35
CAV3P56539 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.23■□□□□ 0.35
CAV3P56539 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.23■□□□□ 0.35
CAV3P56539 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CAV3P56539 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAV3P56539 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms