Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CACNA2D1P54289 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNA2D1P54289 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNA2D1P54289 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.54■□□□□ 0.88
CACNA2D1P54289 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 RBM17P1-201ENST00000453646 1190 ntBASIC20.53■□□□□ 0.88
CACNA2D1P54289 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 AC116562.2-201ENST00000507042 360 ntBASIC20.53■□□□□ 0.88
CACNA2D1P54289 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 AC079598.2-202ENST00000546624 1451 ntBASIC20.53■□□□□ 0.88
CACNA2D1P54289 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNA2D1P54289 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CACNA2D1P54289 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 AC011506.1-201ENST00000474329 610 ntBASIC20.52■□□□□ 0.88
CACNA2D1P54289 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 AC073912.3-201ENST00000624414 853 ntBASIC20.52■□□□□ 0.88
CACNA2D1P54289 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.52■□□□□ 0.88
CACNA2D1P54289 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNA2D1P54289 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CACNA2D1P54289 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA2D1P54289 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CACNA2D1P54289 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms