Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PMS1P54277 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.34■■□□□ 1.01
PMS1P54277 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.33■■□□□ 1.01
PMS1P54277 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 ID1-201ENST00000376105 1233 ntBASIC21.33■■□□□ 1.01
PMS1P54277 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.33■■□□□ 1.01
PMS1P54277 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS1P54277 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PMS1P54277 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PMS1P54277 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PMS1P54277 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.33■■□□□ 1
PMS1P54277 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PMS1P54277 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PMS1P54277 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.32■■□□□ 1
PMS1P54277 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PMS1P54277 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PMS1P54277 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PMS1P54277 POM121L13P-201ENST00000422362 380 ntBASIC21.32■■□□□ 1
PMS1P54277 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.32■■□□□ 1
PMS1P54277 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.32■■□□□ 1
PMS1P54277 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.32■■□□□ 1
PMS1P54277 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.32■■□□□ 1
PMS1P54277 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.32■■□□□ 1
PMS1P54277 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.32■■□□□ 1
PMS1P54277 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS1P54277 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PMS1P54277 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.31■■□□□ 1
PMS1P54277 AC233263.1-201ENST00000578059 224 ntBASIC21.31■■□□□ 1
PMS1P54277 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.31■■□□□ 1
PMS1P54277 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PMS1P54277 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
PMS1P54277 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PMS1P54277 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.31■■□□□ 1
PMS1P54277 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS1P54277 FP475955.4-201ENST00000623131 1990 ntBASIC21.3■■□□□ 1
PMS1P54277 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.3■■□□□ 1
PMS1P54277 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PMS1P54277 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.3■■□□□ 1
PMS1P54277 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.3■■□□□ 1
PMS1P54277 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.3■■□□□ 1
PMS1P54277 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PMS1P54277 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.3■■□□□ 1
PMS1P54277 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.3■■□□□ 1
PMS1P54277 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PMS1P54277 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS1P54277 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PMS1P54277 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.29■■□□□ 1
PMS1P54277 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms