Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.97■□□□□ 0.79
NEK3P51956 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.97■□□□□ 0.79
NEK3P51956 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NEK3P51956 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.97■□□□□ 0.79
NEK3P51956 AC012618.2-201ENST00000428058 849 ntBASIC19.97■□□□□ 0.79
NEK3P51956 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.97■□□□□ 0.79
NEK3P51956 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.97■□□□□ 0.79
NEK3P51956 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NEK3P51956 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 NBPF21P-201ENST00000425093 1451 ntBASIC19.97■□□□□ 0.79
NEK3P51956 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NEK3P51956 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
NEK3P51956 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NEK3P51956 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NEK3P51956 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
NEK3P51956 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.96■□□□□ 0.79
NEK3P51956 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEK3P51956 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.96■□□□□ 0.79
NEK3P51956 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
NEK3P51956 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 AL135905.2-201ENST00000584934 1404 ntBASIC19.95■□□□□ 0.78
NEK3P51956 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.95■□□□□ 0.78
NEK3P51956 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.95■□□□□ 0.78
NEK3P51956 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NEK3P51956 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 RARRES2P10-201ENST00000564312 460 ntBASIC19.95■□□□□ 0.78
NEK3P51956 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.95■□□□□ 0.78
NEK3P51956 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.95■□□□□ 0.78
NEK3P51956 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NEK3P51956 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK3P51956 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK3P51956 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK3P51956 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NEK3P51956 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.94■□□□□ 0.78
NEK3P51956 RPS2P55-201ENST00000397318 883 ntBASIC19.94■□□□□ 0.78
NEK3P51956 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NEK3P51956 AC107956.1-201ENST00000494359 873 ntBASIC19.94■□□□□ 0.78
NEK3P51956 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK3P51956 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.94■□□□□ 0.78
NEK3P51956 AC233702.5-201ENST00000584107 538 ntBASIC19.94■□□□□ 0.78
NEK3P51956 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK3P51956 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK3P51956 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.94■□□□□ 0.78
NEK3P51956 Z82202.1-201ENST00000623446 1880 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms