Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC9A3P48764 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC9A3P48764 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 AC005082.1-201ENST00000413042 2259 ntBASIC17.75■□□□□ 0.43
SLC9A3P48764 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC9A3P48764 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC9A3P48764 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC9A3P48764 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC9A3P48764 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.74■□□□□ 0.43
SLC9A3P48764 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 MIR663A-201ENST00000385250 93 ntBASIC17.74■□□□□ 0.43
SLC9A3P48764 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC9A3P48764 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SLC9A3P48764 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC9A3P48764 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC9A3P48764 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC9A3P48764 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC9A3P48764 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC9A3P48764 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC9A3P48764 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC9A3P48764 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC9A3P48764 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC9A3P48764 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC9A3P48764 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC9A3P48764 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC9A3P48764 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC9A3P48764 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC9A3P48764 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC9A3P48764 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 AC005829.2-201ENST00000571422 1056 ntBASIC17.72■□□□□ 0.43
SLC9A3P48764 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC9A3P48764 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 LTB4R2-202ENST00000528054 3092 ntBASIC17.72■□□□□ 0.43
SLC9A3P48764 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC9A3P48764 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC9A3P48764 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms