Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 AC093484.2-201ENST00000580996 2166 ntBASIC17.25■□□□□ 0.35
CSNK1A1P48729 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 RN7SL471P-201ENST00000580476 299 ntBASIC17.24■□□□□ 0.35
CSNK1A1P48729 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1A1P48729 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1A1P48729 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 TSPY20P-201ENST00000450910 630 ntBASIC17.23■□□□□ 0.35
CSNK1A1P48729 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1A1P48729 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1A1P48729 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 ZNF815P-204ENST00000434898 1737 ntBASIC17.22■□□□□ 0.35
CSNK1A1P48729 AC120498.9-201ENST00000339021 3867 ntBASIC17.22■□□□□ 0.35
CSNK1A1P48729 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms