Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
PCP4P48539 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
PCP4P48539 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
PCP4P48539 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 REXO1L9P-201ENST00000604264 2108 ntBASIC13.43□□□□□ -0.26
PCP4P48539 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.43□□□□□ -0.26
PCP4P48539 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PCP4P48539 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PCP4P48539 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.43□□□□□ -0.26
PCP4P48539 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
PCP4P48539 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.43□□□□□ -0.26
PCP4P48539 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PCP4P48539 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 AC126755.1-201ENST00000525846 6405 ntBASIC13.43□□□□□ -0.26
PCP4P48539 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 TNRC18P2-201ENST00000417666 2714 ntBASIC13.43□□□□□ -0.26
PCP4P48539 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PCP4P48539 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCP4P48539 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCP4P48539 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.42□□□□□ -0.26
PCP4P48539 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.42□□□□□ -0.26
PCP4P48539 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.42□□□□□ -0.26
PCP4P48539 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
PCP4P48539 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 AC079781.5-202ENST00000641784 3743 ntBASIC13.42□□□□□ -0.26
PCP4P48539 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCP4P48539 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.42□□□□□ -0.26
PCP4P48539 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PCP4P48539 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms