Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC6A9P48067 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A9P48067 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A9P48067 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A9P48067 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A9P48067 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A9P48067 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A9P48067 HLA-B-256ENST00000639848 1089 ntBASIC17.12■□□□□ 0.33
SLC6A9P48067 MYC-209ENST00000641252 345 ntBASIC17.12■□□□□ 0.33
SLC6A9P48067 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A9P48067 AC124283.5-201ENST00000624661 1809 ntBASIC17.12■□□□□ 0.33
SLC6A9P48067 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A9P48067 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A9P48067 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 PNMA6B-201ENST00000538162 1200 ntBASIC17.11■□□□□ 0.33
SLC6A9P48067 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC6A9P48067 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 AC060766.5-201ENST00000590539 871 ntBASIC17.11■□□□□ 0.33
SLC6A9P48067 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A9P48067 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC6A9P48067 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC6A9P48067 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A9P48067 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A9P48067 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A9P48067 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A9P48067 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A9P48067 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A9P48067 RPS2P52-201ENST00000469610 820 ntBASIC17.1■□□□□ 0.33
SLC6A9P48067 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A9P48067 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC6A9P48067 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A9P48067 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC6A9P48067 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A9P48067 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A9P48067 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A9P48067 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SLC6A9P48067 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A9P48067 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC6A9P48067 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A9P48067 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.09■□□□□ 0.33
SLC6A9P48067 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC6A9P48067 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC6A9P48067 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC6A9P48067 AC083880.1-201ENST00000608266 535 ntBASIC17.09■□□□□ 0.33
SLC6A9P48067 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC6A9P48067 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A9P48067 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms