Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP13P45452 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP13P45452 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP13P45452 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP13P45452 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP13P45452 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP13P45452 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 ESRRAP1-201ENST00000400596 1257 ntBASIC20.14■□□□□ 0.81
MMP13P45452 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP13P45452 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP13P45452 MIR4651-201ENST00000582622 73 ntBASIC20.14■□□□□ 0.81
MMP13P45452 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP13P45452 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 AL032819.2-201ENST00000624543 2162 ntBASIC20.14■□□□□ 0.81
MMP13P45452 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP13P45452 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP13P45452 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
MMP13P45452 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
MMP13P45452 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP13P45452 LINC01465-201ENST00000408887 1940 ntBASIC20.14■□□□□ 0.81
MMP13P45452 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP13P45452 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MMP13P45452 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP13P45452 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP13P45452 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MMP13P45452 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP13P45452 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP13P45452 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP13P45452 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
MMP13P45452 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 AL121906.2-201ENST00000621597 723 ntBASIC20.13■□□□□ 0.81
MMP13P45452 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MMP13P45452 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP13P45452 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
MMP13P45452 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
MMP13P45452 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.12■□□□□ 0.81
MMP13P45452 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
MMP13P45452 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MMP13P45452 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
MMP13P45452 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP13P45452 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
MMP13P45452 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP13P45452 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP13P45452 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MMP13P45452 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP13P45452 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.11■□□□□ 0.81
MMP13P45452 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP13P45452 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP13P45452 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP13P45452 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP13P45452 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP13P45452 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.1■□□□□ 0.81
MMP13P45452 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP13P45452 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MMP13P45452 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MMP13P45452 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
MMP13P45452 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP13P45452 KRT17P3-201ENST00000420566 1262 ntBASIC20.1■□□□□ 0.81
MMP13P45452 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms