Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.57■□□□□ 0.88
SSR1P43307 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SSR1P43307 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 AC098934.4-201ENST00000564127 592 ntBASIC20.57■□□□□ 0.88
SSR1P43307 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
SSR1P43307 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.56■□□□□ 0.88
SSR1P43307 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SSR1P43307 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.56■□□□□ 0.88
SSR1P43307 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SSR1P43307 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.56■□□□□ 0.88
SSR1P43307 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.56■□□□□ 0.88
SSR1P43307 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSR1P43307 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SSR1P43307 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.55■□□□□ 0.88
SSR1P43307 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.55■□□□□ 0.88
SSR1P43307 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.55■□□□□ 0.88
SSR1P43307 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
SSR1P43307 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.55■□□□□ 0.88
SSR1P43307 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSR1P43307 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR1P43307 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSR1P43307 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.54■□□□□ 0.88
SSR1P43307 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.54■□□□□ 0.88
SSR1P43307 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.54■□□□□ 0.88
SSR1P43307 RPS2P52-201ENST00000469610 820 ntBASIC20.54■□□□□ 0.88
SSR1P43307 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSR1P43307 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.54■□□□□ 0.88
SSR1P43307 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.54■□□□□ 0.88
SSR1P43307 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SSR1P43307 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.54■□□□□ 0.88
SSR1P43307 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR1P43307 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SSR1P43307 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SSR1P43307 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SSR1P43307 AC090192.1-201ENST00000517740 490 ntBASIC20.53■□□□□ 0.88
SSR1P43307 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms