Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.86■□□□□ 0.61
EPHA3P29320 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 AC008694.1-202ENST00000636953 945 ntBASIC18.86■□□□□ 0.61
EPHA3P29320 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 KRT17P1-201ENST00000399211 1546 ntBASIC18.85■□□□□ 0.61
EPHA3P29320 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 AC010980.2-201ENST00000587099 1412 ntBASIC18.85■□□□□ 0.61
EPHA3P29320 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHA3P29320 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.85■□□□□ 0.61
EPHA3P29320 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
EPHA3P29320 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHA3P29320 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHA3P29320 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EPHA3P29320 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA3P29320 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.84■□□□□ 0.61
EPHA3P29320 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA3P29320 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA3P29320 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 AC005332.8-201ENST00000622750 2735 ntBASIC18.84■□□□□ 0.61
EPHA3P29320 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.84■□□□□ 0.61
EPHA3P29320 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA3P29320 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA3P29320 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA3P29320 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA3P29320 ZNF815P-204ENST00000434898 1737 ntBASIC18.83■□□□□ 0.61
EPHA3P29320 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
EPHA3P29320 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA3P29320 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
EPHA3P29320 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.83■□□□□ 0.61
EPHA3P29320 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA3P29320 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.83■□□□□ 0.61
EPHA3P29320 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.83■□□□□ 0.61
EPHA3P29320 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.83■□□□□ 0.6
EPHA3P29320 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
EPHA3P29320 AC016769.1-201ENST00000409132 1010 ntBASIC18.83■□□□□ 0.6
EPHA3P29320 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA3P29320 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms