Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AL020996.1-203ENST00000536896 2307 ntBASIC19.31■□□□□ 0.68
HTR1BP28222 PCDHAC2-203ENST00000615316 3011 ntBASIC19.31■□□□□ 0.68
HTR1BP28222 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1BP28222 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.31■□□□□ 0.68
HTR1BP28222 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.31■□□□□ 0.68
HTR1BP28222 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.31■□□□□ 0.68
HTR1BP28222 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1BP28222 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1BP28222 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1BP28222 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
HTR1BP28222 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HTR1BP28222 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.3■□□□□ 0.68
HTR1BP28222 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.3■□□□□ 0.68
HTR1BP28222 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1BP28222 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1BP28222 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1BP28222 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1BP28222 AL512408.1-201ENST00000569378 2000 ntBASIC19.3■□□□□ 0.68
HTR1BP28222 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HTR1BP28222 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.3■□□□□ 0.68
HTR1BP28222 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.29■□□□□ 0.68
HTR1BP28222 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
HTR1BP28222 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1BP28222 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1BP28222 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.29■□□□□ 0.68
HTR1BP28222 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1BP28222 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1BP28222 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HTR1BP28222 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 KRT8P8-201ENST00000434750 1448 ntBASIC19.28■□□□□ 0.68
HTR1BP28222 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1BP28222 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1BP28222 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1BP28222 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.28■□□□□ 0.68
HTR1BP28222 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.28■□□□□ 0.68
HTR1BP28222 AP000525.1-201ENST00000608286 694 ntBASIC19.28■□□□□ 0.68
HTR1BP28222 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.28■□□□□ 0.68
HTR1BP28222 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1BP28222 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1BP28222 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1BP28222 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HTR1BP28222 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1BP28222 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1BP28222 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.27■□□□□ 0.68
HTR1BP28222 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.27■□□□□ 0.68
HTR1BP28222 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
HTR1BP28222 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HTR1BP28222 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 MIR1238-201ENST00000408483 83 ntBASIC19.27■□□□□ 0.68
HTR1BP28222 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.27■□□□□ 0.68
HTR1BP28222 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HTR1BP28222 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.27■□□□□ 0.68
HTR1BP28222 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HTR1BP28222 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HTR1BP28222 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms