Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MAP4K4-213ENST00000476609 3598 ntTSL 211.74□□□□□ -0.535e-9■■■■□ 23
U2AF2P26368 WDR59-213ENST00000567018 566 ntTSL 310.44□□□□□ -0.742e-17■■■■□ 23
U2AF2P26368 WDR59-220ENST00000569788 805 ntTSL 48.71□□□□□ -1.022e-17■■■■□ 23
U2AF2P26368 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC8.33□□□□□ -1.083e-10■■■■□ 23
U2AF2P26368 MIR4639-201ENST00000584938 69 ntBASIC-0.14□□□□□ -2.433e-11■■■■□ 23
U2AF2P26368 ECI2-210ENST00000495548 814 ntTSL 516.08■□□□□ 0.164e-7■■■■□ 23
U2AF2P26368 ECI2-209ENST00000489086 558 ntTSL 215.46■□□□□ 0.074e-7■■■■□ 23
U2AF2P26368 MKLN1-208ENST00000494286 582 ntTSL 420.41■□□□□ 0.867e-7■■■■□ 23
U2AF2P26368 CCSER2-207ENST00000494144 1562 ntTSL 25.4□□□□□ -1.552e-6■■■■□ 23
U2AF2P26368 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.2□□□□□ -1.582e-6■■■■□ 23
U2AF2P26368 CCSER2-206ENST00000493409 878 ntTSL 53.05□□□□□ -1.922e-6■■■■□ 23
U2AF2P26368 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.189e-8■■■■□ 23
U2AF2P26368 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.022e-6■■■■□ 23
U2AF2P26368 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-7■■■■□ 23
U2AF2P26368 ROCK1-207ENST00000635540 5656 ntTSL 57.9□□□□□ -1.142e-7■■■■□ 23
U2AF2P26368 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.824e-7■■■■□ 23
U2AF2P26368 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.84e-7■■■■□ 23
U2AF2P26368 EHMT1-237ENST00000637261 4208 ntTSL 511.47□□□□□ -0.574e-7■■■■□ 23
U2AF2P26368 MED6-203ENST00000440435 931 ntTSL 2 BASIC11.51□□□□□ -0.574e-9■■■■□ 23
U2AF2P26368 SENP6-212ENST00000503501 2041 ntTSL 2-0.35□□□□□ -2.474e-7■■■■□ 23
U2AF2P26368 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-7■■■■□ 23
U2AF2P26368 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.081e-7■■■■□ 23
U2AF2P26368 SLC20A1-204ENST00000433924 638 ntTSL 413.84□□□□□ -0.195e-9■■■■□ 23
U2AF2P26368 SLC20A1-209ENST00000498224 692 ntTSL 212.15□□□□□ -0.465e-9■■■■□ 23
U2AF2P26368 SLC20A1-205ENST00000456264 574 ntTSL 47.14□□□□□ -1.275e-9■■■■□ 23
U2AF2P26368 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC11.78□□□□□ -0.521e-8■■■■□ 23
U2AF2P26368 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.96□□□□□ -1.141e-8■■■■□ 23
U2AF2P26368 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.321e-8■■■■□ 23
U2AF2P26368 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.016e-9■■■■□ 23
U2AF2P26368 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 16e-9■■■■□ 23
U2AF2P26368 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.746e-9■■■■□ 23
U2AF2P26368 SMARCC2-212ENST00000552566 534 ntTSL 215.69■□□□□ 0.18e-12■■■■□ 23
U2AF2P26368 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.09□□□□□ -0.156e-9■■■■□ 23
U2AF2P26368 SMARCC2-209ENST00000550164 4114 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.56e-9■■■■□ 23
U2AF2P26368 SMARCC2-214ENST00000552674 3730 ntTSL 211.21□□□□□ -0.616e-9■■■■□ 23
U2AF2P26368 SMARCC2-205ENST00000548130 1238 ntTSL 510.01□□□□□ -0.816e-9■■■■□ 23
U2AF2P26368 SMARCC2-215ENST00000552931 608 ntTSL 36.78□□□□□ -1.328e-12■■■■□ 23
U2AF2P26368 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.154e-14■■■■□ 23
U2AF2P26368 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.224e-14■■■■□ 23
U2AF2P26368 DDX39B-210ENST00000431908 914 ntTSL 512.98□□□□□ -0.334e-14■■■■□ 23
U2AF2P26368 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.64e-14■■■■□ 23
U2AF2P26368 DDX39B-220ENST00000482195 1232 ntTSL 211.16□□□□□ -0.624e-14■■■■□ 23
U2AF2P26368 DDX39B-215ENST00000462256 4027 ntTSL 210.11□□□□□ -0.794e-14■■■■□ 23
U2AF2P26368 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.082e-8■■■■□ 22.9
U2AF2P26368 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.092e-8■■■■□ 22.9
U2AF2P26368 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.122e-8■■■■□ 22.9
U2AF2P26368 IST1-205ENST00000439924 1841 ntTSL 513.45□□□□□ -0.262e-8■■■■□ 22.9
U2AF2P26368 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.312e-8■■■■□ 22.9
U2AF2P26368 IST1-206ENST00000456820 2031 ntTSL 512.51□□□□□ -0.412e-8■■■■□ 22.9
U2AF2P26368 IST1-215ENST00000538850 1125 ntTSL 3 BASIC12.45□□□□□ -0.422e-8■■■■□ 22.9
U2AF2P26368 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC12.09□□□□□ -0.472e-8■■■■□ 22.9
U2AF2P26368 IST1-213ENST00000538565 1245 ntTSL 212.05□□□□□ -0.482e-8■■■■□ 22.9
U2AF2P26368 IST1-226ENST00000606369 3583 ntTSL 2 BASIC10.85□□□□□ -0.672e-8■■■■□ 22.9
U2AF2P26368 IST1-208ENST00000535424 4082 ntTSL 5 BASIC10.02□□□□□ -0.82e-8■■■■□ 22.9
U2AF2P26368 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.62■□□□□ 0.736e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.676e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-208ENST00000474502 556 ntTSL 52.63□□□□□ -1.996e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.056e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-203ENST00000414968 558 ntTSL 41.57□□□□□ -2.166e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-207ENST00000465701 201 ntTSL 51.47□□□□□ -2.176e-7■■■■□ 22.9
U2AF2P26368 MAP4K3-213ENST00000497566 528 ntTSL 31.04□□□□□ -2.246e-7■■■■□ 22.9
U2AF2P26368 PPP2R2D-205ENST00000490777 1462 ntTSL 1 (best)18.68■□□□□ 0.582e-14■■■■□ 22.9
U2AF2P26368 PPP2R2D-203ENST00000472664 770 ntTSL 316.12■□□□□ 0.172e-14■■■■□ 22.9
U2AF2P26368 PPP2R2D-206ENST00000517472 573 ntTSL 32.62□□□□□ -1.992e-14■■■■□ 22.9
U2AF2P26368 FARP2-216ENST00000478489 617 ntTSL 323.2■■□□□ 1.31e-6■■■■□ 22.9
U2AF2P26368 FARP2-208ENST00000445489 538 ntTSL 212.42□□□□□ -0.421e-6■■■■□ 22.9
U2AF2P26368 FARP2-209ENST00000464142 442 ntTSL 312.27□□□□□ -0.451e-6■■■■□ 22.9
U2AF2P26368 FARP2-205ENST00000418082 456 ntTSL 411.53□□□□□ -0.561e-6■■■■□ 22.9
U2AF2P26368 FARP2-210ENST00000467260 471 ntTSL 38.22□□□□□ -1.091e-6■■■■□ 22.9
U2AF2P26368 FARP2-213ENST00000473082 397 ntTSL 35.35□□□□□ -1.551e-6■■■■□ 22.9
U2AF2P26368 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.96■■■□□ 2.077e-8■■■■□ 22.9
U2AF2P26368 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.73■□□□□ 0.917e-8■■■■□ 22.9
U2AF2P26368 KEL-204ENST00000467543 786 ntTSL 414.28□□□□□ -0.127e-8■■■■□ 22.9
U2AF2P26368 AC005381.1-203ENST00000591920 569 ntTSL 514.17□□□□□ -0.147e-8■■■■□ 22.9
U2AF2P26368 KEL-202ENST00000460479 556 ntTSL 412.76□□□□□ -0.377e-8■■■■□ 22.9
U2AF2P26368 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC10.53□□□□□ -0.727e-8■■■■□ 22.9
U2AF2P26368 CRNDE-202ENST00000502066 659 ntTSL 1 (best)7.27□□□□□ -1.257e-8■■■■□ 22.9
U2AF2P26368 AC005381.1-202ENST00000592716 574 ntTSL 57.04□□□□□ -1.287e-8■■■■□ 22.9
U2AF2P26368 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.85□□□□□ -1.317e-8■■■■□ 22.9
U2AF2P26368 CRNDE-207ENST00000559598 696 ntTSL 1 (best)6.32□□□□□ -1.47e-8■■■■□ 22.9
U2AF2P26368 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.32□□□□□ -1.47e-8■■■■□ 22.9
U2AF2P26368 CRNDE-204ENST00000558031 464 ntTSL 24.44□□□□□ -1.77e-8■■■■□ 22.9
U2AF2P26368 CRNDE-208ENST00000560029 659 ntTSL 23.56□□□□□ -1.847e-8■■■■□ 22.9
U2AF2P26368 TTC21B-206ENST00000486672 745 ntTSL 26.04□□□□□ -1.445e-16■■■■□ 22.9
U2AF2P26368 TTC21B-207ENST00000489714 647 ntTSL 35.96□□□□□ -1.465e-16■■■■□ 22.9
U2AF2P26368 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.06■■□□□ 1.762e-7■■■■□ 22.9
U2AF2P26368 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.762e-7■■■■□ 22.9
U2AF2P26368 ENTPD4-211ENST00000523958 2026 ntTSL 219.15■□□□□ 0.662e-7■■■■□ 22.9
U2AF2P26368 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.01□□□□□ -0.172e-7■■■■□ 22.9
U2AF2P26368 DEK-207ENST00000515742 661 ntTSL 226.24■■□□□ 1.794e-13■■■■□ 22.9
U2AF2P26368 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.99■□□□□ 0.474e-13■■■■□ 22.9
U2AF2P26368 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.214e-13■■■■□ 22.9
U2AF2P26368 DEK-204ENST00000505224 1372 ntTSL 216.13■□□□□ 0.174e-13■■■■□ 22.9
U2AF2P26368 DEK-203ENST00000503715 580 ntTSL 514.94□□□□□ -0.024e-13■■■■□ 22.9
U2AF2P26368 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.492e-6■■■■□ 22.9
U2AF2P26368 QRICH2-203ENST00000524722 2253 ntTSL 1 (best)15.28■□□□□ 0.042e-6■■■■□ 22.9
U2AF2P26368 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.312e-6■■■■□ 22.9
U2AF2P26368 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)18.58■□□□□ 0.561e-7■■■■□ 22.9
U2AF2P26368 TPM3-220ENST00000509601 543 ntTSL 419.98■□□□□ 0.795e-7■■■■□ 22.9
U2AF2P26368 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.365e-7■■■■□ 22.9
Retrieved 100 of 36,523 protein–RNA pairs in 296.7 ms