RNA–Protein interactions for RNA: ENST00000494144.5

CCSER2-207, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 1,562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-207ENST00000494144 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
CCSER2-207ENST00000494144 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
CCSER2-207ENST00000494144 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
CCSER2-207ENST00000494144 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
CCSER2-207ENST00000494144 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
CCSER2-207ENST00000494144 FOXD1Q16676 465 aa20.41■□□□□ 0.86
CCSER2-207ENST00000494144 MSH5O43196 834 aa19.88■□□□□ 0.77
CCSER2-207ENST00000494144 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
CCSER2-207ENST00000494144 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
CCSER2-207ENST00000494144 POTEHQ6S545 545 aa17.56■□□□□ 0.4
CCSER2-207ENST00000494144 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
CCSER2-207ENST00000494144 ADRA2BP18089 450 aa17.29■□□□□ 0.36
CCSER2-207ENST00000494144 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
CCSER2-207ENST00000494144 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
CCSER2-207ENST00000494144 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
CCSER2-207ENST00000494144 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
CCSER2-207ENST00000494144 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
CCSER2-207ENST00000494144 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
CCSER2-207ENST00000494144 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
CCSER2-207ENST00000494144 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
CCSER2-207ENST00000494144 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
CCSER2-207ENST00000494144 PLSCR2Q9NRY7 297 aa15.31■□□□□ 0.04
CCSER2-207ENST00000494144 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
CCSER2-207ENST00000494144 DSG3P32926 999 aa15.02□□□□□ -0.01
CCSER2-207ENST00000494144 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
CCSER2-207ENST00000494144 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
CCSER2-207ENST00000494144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.079e-8■■■■□ 19.8
CCSER2-207ENST00000494144 CAPN15O75808 1086 aa14.56□□□□□ -0.08
CCSER2-207ENST00000494144 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
CCSER2-207ENST00000494144 LHX8Q68G74 356 aa14.49□□□□□ -0.09
CCSER2-207ENST00000494144 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
CCSER2-207ENST00000494144 HAX1O00165 279 aa14.35□□□□□ -0.11
CCSER2-207ENST00000494144 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
CCSER2-207ENST00000494144 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
CCSER2-207ENST00000494144 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
CCSER2-207ENST00000494144 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
CCSER2-207ENST00000494144 EVX2Q03828 476 aa14.08□□□□□ -0.16
CCSER2-207ENST00000494144 ABCB7O75027 752 aa14.06□□□□□ -0.16
CCSER2-207ENST00000494144 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
CCSER2-207ENST00000494144 POTEMA6NI47 508 aa13.76□□□□□ -0.21
CCSER2-207ENST00000494144 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
CCSER2-207ENST00000494144 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCSER2-207ENST00000494144 PCDH10Q9P2E7 1040 aa13.65□□□□□ -0.22
CCSER2-207ENST00000494144 POTEGQ6S5H5 508 aa13.64□□□□□ -0.23
CCSER2-207ENST00000494144 GABBR2O75899 941 aa13.62□□□□□ -0.23
CCSER2-207ENST00000494144 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CCSER2-207ENST00000494144 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
CCSER2-207ENST00000494144 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
CCSER2-207ENST00000494144 APLP2Q06481 763 aa13.46□□□□□ -0.25
CCSER2-207ENST00000494144 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
CCSER2-207ENST00000494144 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
CCSER2-207ENST00000494144 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
CCSER2-207ENST00000494144 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
CCSER2-207ENST00000494144 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
CCSER2-207ENST00000494144 POLA2Q14181 598 aa12.98□□□□□ -0.33
CCSER2-207ENST00000494144 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
CCSER2-207ENST00000494144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
CCSER2-207ENST00000494144 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
CCSER2-207ENST00000494144 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
CCSER2-207ENST00000494144 EHMT2Q96KQ7 1210 aa12.86□□□□□ -0.35
CCSER2-207ENST00000494144 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
CCSER2-207ENST00000494144 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
CCSER2-207ENST00000494144 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
CCSER2-207ENST00000494144 SLC4A2P04920 1241 aa12.77□□□□□ -0.36
CCSER2-207ENST00000494144 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.36
CCSER2-207ENST00000494144 CLCN6P51797 869 aa12.69□□□□□ -0.38
CCSER2-207ENST00000494144 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
CCSER2-207ENST00000494144 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
CCSER2-207ENST00000494144 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
CCSER2-207ENST00000494144 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
CCSER2-207ENST00000494144 KCNA4P22459 653 aa12.59□□□□□ -0.39
CCSER2-207ENST00000494144 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
CCSER2-207ENST00000494144 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
CCSER2-207ENST00000494144 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
CCSER2-207ENST00000494144 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
CCSER2-207ENST00000494144 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
CCSER2-207ENST00000494144 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
CCSER2-207ENST00000494144 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
CCSER2-207ENST00000494144 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
CCSER2-207ENST00000494144 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
CCSER2-207ENST00000494144 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
CCSER2-207ENST00000494144 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CCSER2-207ENST00000494144 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
CCSER2-207ENST00000494144 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
CCSER2-207ENST00000494144 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
CCSER2-207ENST00000494144 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
CCSER2-207ENST00000494144 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
CCSER2-207ENST00000494144 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
CCSER2-207ENST00000494144 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
CCSER2-207ENST00000494144 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
CCSER2-207ENST00000494144 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
CCSER2-207ENST00000494144 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CCSER2-207ENST00000494144 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
CCSER2-207ENST00000494144 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
CCSER2-207ENST00000494144 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
CCSER2-207ENST00000494144 C7P10643 843 aa11.93□□□□□ -0.5
CCSER2-207ENST00000494144 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
CCSER2-207ENST00000494144 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CCSER2-207ENST00000494144 ST18O60284 1047 aa11.85□□□□□ -0.51
CCSER2-207ENST00000494144 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms