Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.31■□□□□ 0.52
NCK1P16333 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NCK1P16333 AL390961.4-201ENST00000623958 2535 ntBASIC18.31■□□□□ 0.52
NCK1P16333 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NCK1P16333 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NCK1P16333 AC018553.1-201ENST00000616682 1458 ntBASIC18.31■□□□□ 0.52
NCK1P16333 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.31■□□□□ 0.52
NCK1P16333 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
NCK1P16333 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NCK1P16333 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NCK1P16333 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.3■□□□□ 0.52
NCK1P16333 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.3■□□□□ 0.52
NCK1P16333 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.3■□□□□ 0.52
NCK1P16333 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCK1P16333 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.3■□□□□ 0.52
NCK1P16333 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
NCK1P16333 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
NCK1P16333 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
NCK1P16333 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NCK1P16333 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NCK1P16333 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.29■□□□□ 0.52
NCK1P16333 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.29■□□□□ 0.52
NCK1P16333 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 CYP2T3P-201ENST00000601990 817 ntBASIC18.29■□□□□ 0.52
NCK1P16333 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.29■□□□□ 0.52
NCK1P16333 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.29■□□□□ 0.52
NCK1P16333 AL133373.2-201ENST00000623187 2828 ntBASIC18.29■□□□□ 0.52
NCK1P16333 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 AC135050.7-201ENST00000624508 2218 ntBASIC18.29■□□□□ 0.52
NCK1P16333 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCK1P16333 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NCK1P16333 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 FP475955.4-201ENST00000623131 1990 ntBASIC18.28■□□□□ 0.52
NCK1P16333 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NCK1P16333 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.28■□□□□ 0.52
NCK1P16333 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 MIR638-201ENST00000385237 100 ntBASIC18.28■□□□□ 0.52
NCK1P16333 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 AC023632.3-201ENST00000521633 145 ntBASIC18.28■□□□□ 0.52
NCK1P16333 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NCK1P16333 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.28■□□□□ 0.52
NCK1P16333 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
NCK1P16333 NTF6G-201ENST00000591094 616 ntBASIC18.28■□□□□ 0.52
NCK1P16333 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 AC068338.2-201ENST00000563278 1430 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms