Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHRNB1P11230 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 KRT18P38-201ENST00000449496 1282 ntBASIC19.67■□□□□ 0.74
CHRNB1P11230 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNB1P11230 AP003041.3-201ENST00000527151 707 ntBASIC19.67■□□□□ 0.74
CHRNB1P11230 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CHRNB1P11230 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNB1P11230 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CHRNB1P11230 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNB1P11230 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNB1P11230 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNB1P11230 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNB1P11230 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNB1P11230 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CHRNB1P11230 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNB1P11230 AL450487.1-201ENST00000426799 995 ntBASIC19.66■□□□□ 0.74
CHRNB1P11230 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNB1P11230 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.66■□□□□ 0.74
CHRNB1P11230 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNB1P11230 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNB1P11230 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNB1P11230 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 SMG8-203ENST00000578922 2178 ntBASIC19.66■□□□□ 0.74
CHRNB1P11230 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNB1P11230 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHRNB1P11230 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHRNB1P11230 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRNB1P11230 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.65■□□□□ 0.74
CHRNB1P11230 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRNB1P11230 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRNB1P11230 CKBP1-201ENST00000565489 1086 ntBASIC19.65■□□□□ 0.74
CHRNB1P11230 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHRNB1P11230 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNB1P11230 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNB1P11230 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNB1P11230 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.64■□□□□ 0.74
CHRNB1P11230 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNB1P11230 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CHRNB1P11230 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNB1P11230 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.64■□□□□ 0.74
CHRNB1P11230 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNB1P11230 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHRNB1P11230 HCG4P8-203ENST00000443049 980 ntBASIC19.64■□□□□ 0.73
CHRNB1P11230 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNB1P11230 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNB1P11230 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.64■□□□□ 0.73
CHRNB1P11230 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHRNB1P11230 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNB1P11230 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CHRNB1P11230 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 KRT8P45-201ENST00000414328 1447 ntBASIC19.64■□□□□ 0.73
CHRNB1P11230 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHRNB1P11230 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNB1P11230 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNB1P11230 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHRNB1P11230 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms