Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGN1P05114 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGN1P05114 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HMGN1P05114 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGN1P05114 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGN1P05114 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 TFP1-202ENST00000475455 1573 ntBASIC17.54■□□□□ 0.4
HMGN1P05114 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 BID-214ENST00000617586 542 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGN1P05114 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGN1P05114 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 TEX21P-204ENST00000641479 1693 ntBASIC17.54■□□□□ 0.4
HMGN1P05114 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGN1P05114 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMGN1P05114 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGN1P05114 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMGN1P05114 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 KRT17P1-201ENST00000399211 1546 ntBASIC17.53■□□□□ 0.4
HMGN1P05114 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGN1P05114 ZNF815P-204ENST00000434898 1737 ntBASIC17.53■□□□□ 0.4
HMGN1P05114 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 LSM12P1-201ENST00000411836 588 ntBASIC17.53■□□□□ 0.4
HMGN1P05114 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.53■□□□□ 0.4
HMGN1P05114 AC006015.1-201ENST00000429970 570 ntBASIC17.53■□□□□ 0.4
HMGN1P05114 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGN1P05114 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGN1P05114 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGN1P05114 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGN1P05114 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGN1P05114 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGN1P05114 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HMGN1P05114 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 KRT18P5-201ENST00000436075 1291 ntBASIC17.52■□□□□ 0.4
HMGN1P05114 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGN1P05114 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGN1P05114 AC087623.3-201ENST00000607047 1098 ntBASIC17.52■□□□□ 0.4
HMGN1P05114 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGN1P05114 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGN1P05114 AC006333.2-201ENST00000607957 2099 ntBASIC17.52■□□□□ 0.39
HMGN1P05114 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.52■□□□□ 0.39
HMGN1P05114 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HMGN1P05114 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGN1P05114 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGN1P05114 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGN1P05114 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGN1P05114 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms