Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC093503.3-201ENST00000624917 2352 ntBASIC20.05■□□□□ 0.8
IFNB1P01574 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
IFNB1P01574 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IFNB1P01574 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.04■□□□□ 0.8
IFNB1P01574 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 SLC29A4P1-201ENST00000398760 971 ntBASIC20.04■□□□□ 0.8
IFNB1P01574 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 AC091874.3-201ENST00000512672 1195 ntBASIC20.04■□□□□ 0.8
IFNB1P01574 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.04■□□□□ 0.8
IFNB1P01574 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
IFNB1P01574 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.04■□□□□ 0.8
IFNB1P01574 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.04■□□□□ 0.8
IFNB1P01574 AC092118.2-201ENST00000613495 667 ntBASIC20.04■□□□□ 0.8
IFNB1P01574 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
IFNB1P01574 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFNB1P01574 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
IFNB1P01574 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
IFNB1P01574 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IFNB1P01574 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.03■□□□□ 0.8
IFNB1P01574 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
IFNB1P01574 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.03■□□□□ 0.8
IFNB1P01574 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.03■□□□□ 0.8
IFNB1P01574 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.03■□□□□ 0.8
IFNB1P01574 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.03■□□□□ 0.8
IFNB1P01574 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.03■□□□□ 0.8
IFNB1P01574 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFNB1P01574 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.8
IFNB1P01574 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.02■□□□□ 0.8
IFNB1P01574 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
IFNB1P01574 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.02■□□□□ 0.8
IFNB1P01574 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.02■□□□□ 0.8
IFNB1P01574 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.02■□□□□ 0.8
IFNB1P01574 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.02■□□□□ 0.8
IFNB1P01574 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNB1P01574 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
IFNB1P01574 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFNB1P01574 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
IFNB1P01574 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.02■□□□□ 0.79
IFNB1P01574 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
IFNB1P01574 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 RPS2P52-201ENST00000469610 820 ntBASIC20.01■□□□□ 0.79
IFNB1P01574 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
IFNB1P01574 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNB1P01574 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
IFNB1P01574 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
IFNB1P01574 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
IFNB1P01574 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFNB1P01574 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFNB1P01574 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20■□□□□ 0.79
IFNB1P01574 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
IFNB1P01574 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
IFNB1P01574 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFNB1P01574 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms