Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.76■□□□□ 0.27
DHFRP00374 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.76■□□□□ 0.27
DHFRP00374 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 MIR572-201ENST00000384983 95 ntBASIC16.75■□□□□ 0.27
DHFRP00374 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DHFRP00374 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.75■□□□□ 0.27
DHFRP00374 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
DHFRP00374 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.74■□□□□ 0.27
DHFRP00374 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.74■□□□□ 0.27
DHFRP00374 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.74■□□□□ 0.27
DHFRP00374 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.74■□□□□ 0.27
DHFRP00374 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.74■□□□□ 0.27
DHFRP00374 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.74■□□□□ 0.27
DHFRP00374 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.74■□□□□ 0.27
DHFRP00374 AL136967.2-201ENST00000623968 743 ntBASIC16.74■□□□□ 0.27
DHFRP00374 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
DHFRP00374 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.74■□□□□ 0.27
DHFRP00374 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
DHFRP00374 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DHFRP00374 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DHFRP00374 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.73■□□□□ 0.27
DHFRP00374 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.73■□□□□ 0.27
DHFRP00374 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
DHFRP00374 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 AL161938.1-201ENST00000569833 2180 ntBASIC16.73■□□□□ 0.27
DHFRP00374 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DHFRP00374 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DHFRP00374 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
DHFRP00374 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms