Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.28■□□□□ 0.36
CDRT1O95170 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 AC020916.1-201ENST00000587762 1774 ntBASIC17.28■□□□□ 0.36
CDRT1O95170 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.27■□□□□ 0.36
CDRT1O95170 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.27■□□□□ 0.36
CDRT1O95170 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.27■□□□□ 0.36
CDRT1O95170 AC019069.1-201ENST00000610008 1333 ntBASIC17.27■□□□□ 0.36
CDRT1O95170 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDRT1O95170 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CDRT1O95170 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.27■□□□□ 0.36
CDRT1O95170 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDRT1O95170 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.27■□□□□ 0.36
CDRT1O95170 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.27■□□□□ 0.36
CDRT1O95170 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.27■□□□□ 0.36
CDRT1O95170 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.27■□□□□ 0.36
CDRT1O95170 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
CDRT1O95170 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.27■□□□□ 0.36
CDRT1O95170 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.27■□□□□ 0.36
CDRT1O95170 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDRT1O95170 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.27■□□□□ 0.36
CDRT1O95170 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.27■□□□□ 0.35
CDRT1O95170 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDRT1O95170 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.27■□□□□ 0.35
CDRT1O95170 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDRT1O95170 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
CDRT1O95170 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDRT1O95170 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDRT1O95170 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDRT1O95170 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.26■□□□□ 0.35
CDRT1O95170 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDRT1O95170 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 SLC7A5P1-201ENST00000568957 537 ntBASIC17.26■□□□□ 0.35
CDRT1O95170 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.26■□□□□ 0.35
CDRT1O95170 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDRT1O95170 KRT16P6-202ENST00000425692 1426 ntBASIC17.26■□□□□ 0.35
CDRT1O95170 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDRT1O95170 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDRT1O95170 NOC2LP1-202ENST00000452600 2235 ntBASIC17.25■□□□□ 0.35
CDRT1O95170 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.25■□□□□ 0.35
CDRT1O95170 NOC2LP2-201ENST00000407594 1944 ntBASIC17.25■□□□□ 0.35
CDRT1O95170 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDRT1O95170 HTR7P1-202ENST00000624664 4411 ntBASIC17.25■□□□□ 0.35
CDRT1O95170 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.25■□□□□ 0.35
CDRT1O95170 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDRT1O95170 BCL2-203ENST00000589955 5011 ntBASIC17.25■□□□□ 0.35
CDRT1O95170 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDRT1O95170 KRT8P17-201ENST00000453110 1448 ntBASIC17.25■□□□□ 0.35
CDRT1O95170 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDRT1O95170 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms