Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SNCGO76070 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SNCGO76070 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 RNF126P1-201ENST00000567452 1320 ntBASIC13.07□□□□□ -0.32
SNCGO76070 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SNCGO76070 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.07□□□□□ -0.32
SNCGO76070 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SNCGO76070 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 AC092720.2-201ENST00000602388 1665 ntBASIC13.06□□□□□ -0.32
SNCGO76070 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.06□□□□□ -0.32
SNCGO76070 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SNCGO76070 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.06□□□□□ -0.32
SNCGO76070 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
SNCGO76070 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNCGO76070 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
SNCGO76070 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SNCGO76070 AC125437.2-201ENST00000625180 2167 ntBASIC13.05□□□□□ -0.32
SNCGO76070 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SNCGO76070 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SNCGO76070 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SNCGO76070 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCGO76070 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SNCGO76070 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.05□□□□□ -0.32
SNCGO76070 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCGO76070 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCGO76070 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SNCGO76070 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNCGO76070 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 NOC2LP2-201ENST00000407594 1944 ntBASIC13.05□□□□□ -0.32
SNCGO76070 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCGO76070 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCGO76070 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms