Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC092296.2-201ENST00000589470 999 ntBASIC17.38■□□□□ 0.37
PFDN1O60925 RAP2CP1-202ENST00000605179 643 ntBASIC17.38■□□□□ 0.37
PFDN1O60925 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
PFDN1O60925 AL118508.1-201ENST00000613502 2345 ntBASIC17.38■□□□□ 0.37
PFDN1O60925 AL691432.2-201ENST00000607222 2038 ntBASIC17.38■□□□□ 0.37
PFDN1O60925 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.38■□□□□ 0.37
PFDN1O60925 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PFDN1O60925 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PFDN1O60925 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PFDN1O60925 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PFDN1O60925 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 RPS2P7-201ENST00000447334 885 ntBASIC17.37■□□□□ 0.37
PFDN1O60925 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 AC003102.1-202ENST00000563394 1796 ntBASIC17.37■□□□□ 0.37
PFDN1O60925 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PFDN1O60925 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PFDN1O60925 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PFDN1O60925 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 AC006333.2-201ENST00000607957 2099 ntBASIC17.36■□□□□ 0.37
PFDN1O60925 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 AC012317.2-201ENST00000623305 2251 ntBASIC17.36■□□□□ 0.37
PFDN1O60925 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.36■□□□□ 0.37
PFDN1O60925 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PFDN1O60925 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PFDN1O60925 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PFDN1O60925 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PFDN1O60925 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PFDN1O60925 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.35■□□□□ 0.37
PFDN1O60925 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PFDN1O60925 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.35■□□□□ 0.37
PFDN1O60925 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.35■□□□□ 0.37
PFDN1O60925 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms