Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 BX323043.1-201ENST00000641006 1765 ntBASIC18.66■□□□□ 0.58
PRAMEF4O60810 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 AC124016.1-201ENST00000609552 612 ntBASIC18.66■□□□□ 0.58
PRAMEF4O60810 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF4O60810 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
PRAMEF4O60810 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 C1QL1P1-201ENST00000568105 661 ntBASIC18.65■□□□□ 0.58
PRAMEF4O60810 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF4O60810 AC141586.3-201ENST00000562166 1838 ntBASIC18.65■□□□□ 0.58
PRAMEF4O60810 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRAMEF4O60810 AL049812.1-201ENST00000432563 2267 ntBASIC18.65■□□□□ 0.58
PRAMEF4O60810 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
PRAMEF4O60810 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.64■□□□□ 0.58
PRAMEF4O60810 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 AC133681.1-201ENST00000465482 601 ntBASIC18.64■□□□□ 0.57
PRAMEF4O60810 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 HLA-A-209ENST00000638375 975 ntBASIC18.64■□□□□ 0.57
PRAMEF4O60810 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF4O60810 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms