Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 AP002982.1-201ENST00000492365 877 ntBASIC22.04■■□□□ 1.12
CCNT1O60563 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.04■■□□□ 1.12
CCNT1O60563 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.04■■□□□ 1.12
CCNT1O60563 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 AF186192.3-201ENST00000583427 947 ntBASIC22.04■■□□□ 1.12
CCNT1O60563 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.04■■□□□ 1.12
CCNT1O60563 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCNT1O60563 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.04■■□□□ 1.12
CCNT1O60563 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNT1O60563 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNT1O60563 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
CCNT1O60563 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 AC116562.4-201ENST00000641316 2276 ntBASIC22.03■■□□□ 1.12
CCNT1O60563 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CCNT1O60563 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.03■■□□□ 1.12
CCNT1O60563 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNT1O60563 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CCNT1O60563 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNT1O60563 AC104417.2-201ENST00000562989 1793 ntBASIC22.02■■□□□ 1.12
CCNT1O60563 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.02■■□□□ 1.12
CCNT1O60563 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.02■■□□□ 1.12
CCNT1O60563 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.02■■□□□ 1.12
CCNT1O60563 NIFKP9-201ENST00000419265 221 ntBASIC22.02■■□□□ 1.12
CCNT1O60563 AL353807.1-201ENST00000427475 662 ntBASIC22.02■■□□□ 1.12
CCNT1O60563 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.02■■□□□ 1.12
CCNT1O60563 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.02■■□□□ 1.12
CCNT1O60563 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CCNT1O60563 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNT1O60563 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CCNT1O60563 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.02■■□□□ 1.12
CCNT1O60563 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.02■■□□□ 1.11
CCNT1O60563 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNT1O60563 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNT1O60563 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNT1O60563 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNT1O60563 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 AL135905.2-201ENST00000584934 1404 ntBASIC22.01■■□□□ 1.11
CCNT1O60563 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNT1O60563 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNT1O60563 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNT1O60563 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNT1O60563 RPS2P4-201ENST00000476944 856 ntBASIC22.01■■□□□ 1.11
CCNT1O60563 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.01■■□□□ 1.11
CCNT1O60563 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNT1O60563 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNT1O60563 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNT1O60563 AL353708.3-201ENST00000610272 989 ntBASIC22.01■■□□□ 1.11
CCNT1O60563 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.01■■□□□ 1.11
CCNT1O60563 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNT1O60563 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CCNT1O60563 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNT1O60563 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CCNT1O60563 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNT1O60563 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
CCNT1O60563 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22■■□□□ 1.11
CCNT1O60563 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCNT1O60563 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNT1O60563 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNT1O60563 RPS2P55-201ENST00000397318 883 ntBASIC22■■□□□ 1.11
CCNT1O60563 AC107956.1-201ENST00000494359 873 ntBASIC22■■□□□ 1.11
CCNT1O60563 AC008550.1-201ENST00000511500 884 ntBASIC22■■□□□ 1.11
CCNT1O60563 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22■■□□□ 1.11
CCNT1O60563 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22■■□□□ 1.11
CCNT1O60563 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22■■□□□ 1.11
CCNT1O60563 Z99916.2-201ENST00000604037 246 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms