Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GMDSO60547 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.12■□□□□ 0.33
GMDSO60547 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GMDSO60547 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
GMDSO60547 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GMDSO60547 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
GMDSO60547 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.11■□□□□ 0.33
GMDSO60547 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.11■□□□□ 0.33
GMDSO60547 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.11■□□□□ 0.33
GMDSO60547 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.11■□□□□ 0.33
GMDSO60547 AC091874.3-201ENST00000512672 1195 ntBASIC17.11■□□□□ 0.33
GMDSO60547 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.11■□□□□ 0.33
GMDSO60547 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.11■□□□□ 0.33
GMDSO60547 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
GMDSO60547 AL138781.1-201ENST00000566567 1274 ntBASIC17.11■□□□□ 0.33
GMDSO60547 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.11■□□□□ 0.33
GMDSO60547 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.11■□□□□ 0.33
GMDSO60547 AC133041.1-202ENST00000642053 222 ntBASIC17.11■□□□□ 0.33
GMDSO60547 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
GMDSO60547 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GMDSO60547 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GMDSO60547 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
GMDSO60547 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.1■□□□□ 0.33
GMDSO60547 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.1■□□□□ 0.33
GMDSO60547 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 AC142086.2-201ENST00000569753 217 ntBASIC17.1■□□□□ 0.33
GMDSO60547 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.1■□□□□ 0.33
GMDSO60547 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.1■□□□□ 0.33
GMDSO60547 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
GMDSO60547 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.1■□□□□ 0.33
GMDSO60547 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 AC009237.14-201ENST00000609975 1594 ntBASIC17.1■□□□□ 0.33
GMDSO60547 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GMDSO60547 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.1■□□□□ 0.33
GMDSO60547 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
GMDSO60547 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GMDSO60547 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GMDSO60547 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
GMDSO60547 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GMDSO60547 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GMDSO60547 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 ID1-201ENST00000376105 1233 ntBASIC17.09■□□□□ 0.33
GMDSO60547 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.09■□□□□ 0.33
GMDSO60547 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.09■□□□□ 0.33
GMDSO60547 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.09■□□□□ 0.33
GMDSO60547 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.09■□□□□ 0.33
GMDSO60547 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.09■□□□□ 0.33
GMDSO60547 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GMDSO60547 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GMDSO60547 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms