Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNCRIPO60506 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.81■□□□□ 0.76
SYNCRIPO60506 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNCRIPO60506 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
SYNCRIPO60506 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNCRIPO60506 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNCRIPO60506 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNCRIPO60506 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SYNCRIPO60506 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 RN7SL850P-201ENST00000579959 291 ntBASIC19.8■□□□□ 0.76
SYNCRIPO60506 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNCRIPO60506 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNCRIPO60506 CYP2D8P-201ENST00000433633 1490 ntBASIC19.79■□□□□ 0.76
SYNCRIPO60506 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
SYNCRIPO60506 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNCRIPO60506 AC004980.1-204ENST00000429707 299 ntBASIC19.79■□□□□ 0.76
SYNCRIPO60506 B3GAT3P1-201ENST00000471720 806 ntBASIC19.79■□□□□ 0.76
SYNCRIPO60506 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 DGCR10-201ENST00000609839 495 ntBASIC19.79■□□□□ 0.76
SYNCRIPO60506 AC092865.7-201ENST00000641832 219 ntBASIC19.79■□□□□ 0.76
SYNCRIPO60506 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNCRIPO60506 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNCRIPO60506 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.79■□□□□ 0.76
SYNCRIPO60506 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNCRIPO60506 BX119927.1-201ENST00000636596 1552 ntBASIC19.78■□□□□ 0.76
SYNCRIPO60506 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNCRIPO60506 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 AL162377.1-201ENST00000618844 1793 ntBASIC19.78■□□□□ 0.76
SYNCRIPO60506 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNCRIPO60506 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNCRIPO60506 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 C2orf69P3-201ENST00000565542 1120 ntBASIC19.78■□□□□ 0.76
SYNCRIPO60506 AC010947.1-201ENST00000623454 693 ntBASIC19.78■□□□□ 0.76
SYNCRIPO60506 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNCRIPO60506 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNCRIPO60506 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SYNCRIPO60506 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNCRIPO60506 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNCRIPO60506 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNCRIPO60506 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 AC005521.1-201ENST00000393351 872 ntBASIC19.77■□□□□ 0.76
SYNCRIPO60506 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 MESTP1-201ENST00000404287 994 ntBASIC19.77■□□□□ 0.76
SYNCRIPO60506 AC097488.1-201ENST00000507834 756 ntBASIC19.77■□□□□ 0.76
SYNCRIPO60506 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNCRIPO60506 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNCRIPO60506 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNCRIPO60506 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms