Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.32■□□□□ 0.52
URB1O60287 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.32■□□□□ 0.52
URB1O60287 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
URB1O60287 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
URB1O60287 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
URB1O60287 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.32■□□□□ 0.52
URB1O60287 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.32■□□□□ 0.52
URB1O60287 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.31■□□□□ 0.52
URB1O60287 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
URB1O60287 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
URB1O60287 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
URB1O60287 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.31■□□□□ 0.52
URB1O60287 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
URB1O60287 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 STARP1-201ENST00000397973 869 ntBASIC18.31■□□□□ 0.52
URB1O60287 AL022342.1-201ENST00000400363 863 ntBASIC18.31■□□□□ 0.52
URB1O60287 FAAHP1-202ENST00000446499 1238 ntBASIC18.31■□□□□ 0.52
URB1O60287 AC112907.2-201ENST00000448639 330 ntBASIC18.31■□□□□ 0.52
URB1O60287 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
URB1O60287 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.3■□□□□ 0.52
URB1O60287 TUBB8P6-201ENST00000436895 1288 ntBASIC18.3■□□□□ 0.52
URB1O60287 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.3■□□□□ 0.52
URB1O60287 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
URB1O60287 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.3■□□□□ 0.52
URB1O60287 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.3■□□□□ 0.52
URB1O60287 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.3■□□□□ 0.52
URB1O60287 AC139530.3-201ENST00000620344 690 ntBASIC18.3■□□□□ 0.52
URB1O60287 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.3■□□□□ 0.52
URB1O60287 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
URB1O60287 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
URB1O60287 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
URB1O60287 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.29■□□□□ 0.52
URB1O60287 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.29■□□□□ 0.52
URB1O60287 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.29■□□□□ 0.52
URB1O60287 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.29■□□□□ 0.52
URB1O60287 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
URB1O60287 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.29■□□□□ 0.52
URB1O60287 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 AL117328.2-201ENST00000624617 1940 ntBASIC18.29■□□□□ 0.52
URB1O60287 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.29■□□□□ 0.52
URB1O60287 CA15P1-201ENST00000481698 905 ntBASIC18.29■□□□□ 0.52
URB1O60287 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
URB1O60287 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
URB1O60287 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 TFP1-202ENST00000475455 1573 ntBASIC18.28■□□□□ 0.52
URB1O60287 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 KRT8P17-201ENST00000453110 1448 ntBASIC18.28■□□□□ 0.52
URB1O60287 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
URB1O60287 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms