Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.82■□□□□ 0.12
SSSCA1O60232 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.82■□□□□ 0.12
SSSCA1O60232 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SSSCA1O60232 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SSSCA1O60232 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.82■□□□□ 0.12
SSSCA1O60232 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SSSCA1O60232 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 LINC02228-203ENST00000641970 1355 ntBASIC15.82■□□□□ 0.12
SSSCA1O60232 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.81■□□□□ 0.12
SSSCA1O60232 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SSSCA1O60232 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.81■□□□□ 0.12
SSSCA1O60232 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.81■□□□□ 0.12
SSSCA1O60232 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.81■□□□□ 0.12
SSSCA1O60232 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.81■□□□□ 0.12
SSSCA1O60232 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.81■□□□□ 0.12
SSSCA1O60232 LTB4R2-202ENST00000528054 3092 ntBASIC15.81■□□□□ 0.12
SSSCA1O60232 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.81■□□□□ 0.12
SSSCA1O60232 WIZP1-201ENST00000531444 2299 ntBASIC15.81■□□□□ 0.12
SSSCA1O60232 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.81■□□□□ 0.12
SSSCA1O60232 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
SSSCA1O60232 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.81■□□□□ 0.12
SSSCA1O60232 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SSSCA1O60232 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSSCA1O60232 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 AC090164.3-201ENST00000610780 2143 ntBASIC15.8■□□□□ 0.12
SSSCA1O60232 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.8■□□□□ 0.12
SSSCA1O60232 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.8■□□□□ 0.12
SSSCA1O60232 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.8■□□□□ 0.12
SSSCA1O60232 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SSSCA1O60232 TERF1P2-201ENST00000583350 1212 ntBASIC15.8■□□□□ 0.12
SSSCA1O60232 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.8■□□□□ 0.12
SSSCA1O60232 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.8■□□□□ 0.12
SSSCA1O60232 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SSSCA1O60232 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSSCA1O60232 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.8■□□□□ 0.12
SSSCA1O60232 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.8■□□□□ 0.12
SSSCA1O60232 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSSCA1O60232 TEX21P-204ENST00000641479 1693 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 FZD10-202ENST00000539839 3282 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.79■□□□□ 0.12
SSSCA1O60232 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SSSCA1O60232 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.79■□□□□ 0.12
SSSCA1O60232 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSSCA1O60232 AC008406.3-201ENST00000620001 1374 ntBASIC15.79■□□□□ 0.12
SSSCA1O60232 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms