Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.07■□□□□ 0.8
ATP9BO43861 AL049637.2-201ENST00000641778 930 ntBASIC20.07■□□□□ 0.8
ATP9BO43861 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP9BO43861 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
ATP9BO43861 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP9BO43861 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP9BO43861 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP9BO43861 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP9BO43861 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ATP9BO43861 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP9BO43861 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP9BO43861 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP9BO43861 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP9BO43861 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP9BO43861 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP9BO43861 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP9BO43861 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP9BO43861 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP9BO43861 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ATP9BO43861 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP9BO43861 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ATP9BO43861 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP9BO43861 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATP9BO43861 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 HTR7P1-201ENST00000538670 1336 ntBASIC20.05■□□□□ 0.8
ATP9BO43861 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ATP9BO43861 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP9BO43861 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 SNORA78-201ENST00000459373 127 ntBASIC20.05■□□□□ 0.8
ATP9BO43861 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP9BO43861 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP9BO43861 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP9BO43861 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP9BO43861 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP9BO43861 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
ATP9BO43861 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ATP9BO43861 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP9BO43861 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP9BO43861 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATP9BO43861 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP9BO43861 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
ATP9BO43861 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 AP006587.1-201ENST00000534129 1502 ntBASIC20.04■□□□□ 0.8
ATP9BO43861 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP9BO43861 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 AC113410.3-201ENST00000623366 203 ntBASIC20.04■□□□□ 0.8
ATP9BO43861 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP9BO43861 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP9BO43861 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP9BO43861 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP9BO43861 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP9BO43861 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ATP9BO43861 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATP9BO43861 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP9BO43861 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP9BO43861 AL353807.1-201ENST00000427475 662 ntBASIC20.03■□□□□ 0.8
ATP9BO43861 AF186192.3-201ENST00000583427 947 ntBASIC20.03■□□□□ 0.8
ATP9BO43861 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP9BO43861 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP9BO43861 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP9BO43861 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP9BO43861 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms