Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RNF13O43567 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF13O43567 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 AC069152.1-201ENST00000438030 544 ntBASIC17.64■□□□□ 0.41
RNF13O43567 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF13O43567 AC060766.5-201ENST00000590539 871 ntBASIC17.64■□□□□ 0.41
RNF13O43567 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RNF13O43567 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
RNF13O43567 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF13O43567 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF13O43567 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF13O43567 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF13O43567 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 RPS2P52-201ENST00000469610 820 ntBASIC17.63■□□□□ 0.41
RNF13O43567 PNMA6B-201ENST00000538162 1200 ntBASIC17.63■□□□□ 0.41
RNF13O43567 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF13O43567 AC083880.1-201ENST00000608266 535 ntBASIC17.63■□□□□ 0.41
RNF13O43567 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RNF13O43567 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF13O43567 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 AC124283.5-201ENST00000624661 1809 ntBASIC17.63■□□□□ 0.41
RNF13O43567 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF13O43567 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 TFP1-202ENST00000475455 1573 ntBASIC17.62■□□□□ 0.41
RNF13O43567 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF13O43567 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF13O43567 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.62■□□□□ 0.41
RNF13O43567 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF13O43567 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF13O43567 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF13O43567 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF13O43567 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF13O43567 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF13O43567 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RNF13O43567 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF13O43567 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF13O43567 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF13O43567 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF13O43567 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF13O43567 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 AL355802.2-201ENST00000402069 882 ntBASIC17.61■□□□□ 0.41
RNF13O43567 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.61■□□□□ 0.41
RNF13O43567 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF13O43567 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF13O43567 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF13O43567 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF13O43567 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms