Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN9O14815 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.46■□□□□ 0.87
CAPN9O14815 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CAPN9O14815 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CAPN9O14815 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN9O14815 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CAPN9O14815 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN9O14815 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CAPN9O14815 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN9O14815 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN9O14815 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.45■□□□□ 0.86
CAPN9O14815 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN9O14815 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN9O14815 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN9O14815 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.44■□□□□ 0.86
CAPN9O14815 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CAPN9O14815 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN9O14815 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPN9O14815 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPN9O14815 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.43■□□□□ 0.86
CAPN9O14815 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPN9O14815 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN9O14815 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CAPN9O14815 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
CAPN9O14815 KRT8P8-201ENST00000434750 1448 ntBASIC20.43■□□□□ 0.86
CAPN9O14815 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN9O14815 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.42■□□□□ 0.86
CAPN9O14815 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CAPN9O14815 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN9O14815 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.42■□□□□ 0.86
CAPN9O14815 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN9O14815 HTR7P1-201ENST00000538670 1336 ntBASIC20.42■□□□□ 0.86
CAPN9O14815 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN9O14815 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN9O14815 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN9O14815 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms