Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KSR1P1-201ENST00000446298 240 ntBASIC18.29■□□□□ 0.52
CLDN4O14493 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN4O14493 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.29■□□□□ 0.52
CLDN4O14493 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CLDN4O14493 AC073195.1-201ENST00000607241 877 ntBASIC18.29■□□□□ 0.52
CLDN4O14493 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN4O14493 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN4O14493 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN4O14493 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CLDN4O14493 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN4O14493 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN4O14493 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN4O14493 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN4O14493 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN4O14493 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN4O14493 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN4O14493 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN4O14493 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN4O14493 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN4O14493 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN4O14493 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN4O14493 RPS2P4-201ENST00000476944 856 ntBASIC18.28■□□□□ 0.52
CLDN4O14493 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN4O14493 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 AC233702.5-201ENST00000584107 538 ntBASIC18.28■□□□□ 0.52
CLDN4O14493 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.28■□□□□ 0.52
CLDN4O14493 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN4O14493 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN4O14493 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN4O14493 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN4O14493 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN4O14493 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.27■□□□□ 0.52
CLDN4O14493 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.27■□□□□ 0.52
CLDN4O14493 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN4O14493 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN4O14493 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN4O14493 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN4O14493 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN4O14493 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN4O14493 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN4O14493 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN4O14493 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 HCG11-201ENST00000411553 5696 ntBASIC18.26■□□□□ 0.51
CLDN4O14493 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.26■□□□□ 0.51
CLDN4O14493 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN4O14493 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN4O14493 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN4O14493 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN4O14493 Z99916.2-201ENST00000604037 246 ntBASIC18.26■□□□□ 0.51
CLDN4O14493 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN4O14493 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN4O14493 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN4O14493 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN4O14493 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN4O14493 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLDN4O14493 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms