Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CCL21O00585 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL21O00585 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL21O00585 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL21O00585 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL21O00585 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL21O00585 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.1■□□□□ 0.33
CCL21O00585 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL21O00585 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 AL136038.3-201ENST00000561909 1096 ntBASIC17.1■□□□□ 0.33
CCL21O00585 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 CLEC4GP1-201ENST00000596555 870 ntBASIC17.1■□□□□ 0.33
CCL21O00585 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL21O00585 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCL21O00585 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL21O00585 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL21O00585 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL21O00585 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL21O00585 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL21O00585 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL21O00585 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCL21O00585 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL21O00585 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL21O00585 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL21O00585 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL21O00585 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCL21O00585 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
CCL21O00585 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 KRT8P41-201ENST00000533985 1514 ntBASIC17.09■□□□□ 0.33
CCL21O00585 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 AC133561.1-201ENST00000568600 2415 ntBASIC17.09■□□□□ 0.33
CCL21O00585 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL21O00585 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL21O00585 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.08■□□□□ 0.33
CCL21O00585 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.08■□□□□ 0.33
CCL21O00585 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL21O00585 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCL21O00585 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL21O00585 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 ZNF444P1-201ENST00000559497 298 ntBASIC17.08■□□□□ 0.32
CCL21O00585 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL21O00585 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL21O00585 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCL21O00585 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL21O00585 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CCL21O00585 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCL21O00585 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL21O00585 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL21O00585 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL21O00585 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL21O00585 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL21O00585 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL21O00585 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCL21O00585 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL21O00585 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms