Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN3O00409 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
FOXN3O00409 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
FOXN3O00409 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXN3O00409 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 NBPF21P-201ENST00000425093 1451 ntBASIC20.76■□□□□ 0.91
FOXN3O00409 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXN3O00409 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 ESRRAP1-201ENST00000400596 1257 ntBASIC20.76■□□□□ 0.91
FOXN3O00409 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.76■□□□□ 0.91
FOXN3O00409 PRKY-204ENST00000533551 1019 ntBASIC20.76■□□□□ 0.91
FOXN3O00409 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN3O00409 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FOXN3O00409 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FOXN3O00409 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
FOXN3O00409 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FOXN3O00409 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXN3O00409 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.75■□□□□ 0.91
FOXN3O00409 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 AC141586.3-201ENST00000562166 1838 ntBASIC20.75■□□□□ 0.91
FOXN3O00409 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
FOXN3O00409 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
FOXN3O00409 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXN3O00409 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN3O00409 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.74■□□□□ 0.91
FOXN3O00409 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FOXN3O00409 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 TNXA-203ENST00000507684 2038 ntBASIC20.74■□□□□ 0.91
FOXN3O00409 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.74■□□□□ 0.91
FOXN3O00409 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN3O00409 LINC01465-201ENST00000408887 1940 ntBASIC20.74■□□□□ 0.91
FOXN3O00409 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXN3O00409 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN3O00409 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN3O00409 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN3O00409 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.73■□□□□ 0.91
FOXN3O00409 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.73■□□□□ 0.91
FOXN3O00409 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN3O00409 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 AL161938.1-201ENST00000569833 2180 ntBASIC20.73■□□□□ 0.91
FOXN3O00409 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
FOXN3O00409 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
FOXN3O00409 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
FOXN3O00409 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms