Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.76■■□□□ 1.07
SPDYE4A6NLX3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 AC018470.1-201ENST00000624790 3129 ntBASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 SNORA78-201ENST00000459373 127 ntBASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 AC105020.6-201ENST00000621523 1217 ntBASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SPDYE4A6NLX3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 AC233263.1-201ENST00000578059 224 ntBASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SPDYE4A6NLX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 COA4-204ENST00000541455 1038 ntTSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
SPDYE4A6NLX3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms