Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 AC011558.1-201ENST00000623459 338 ntBASIC25.78■■□□□ 1.72
RTL1A6NKG5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTL1A6NKG5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL1A6NKG5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL1A6NKG5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL1A6NKG5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 AL441883.1-201ENST00000566170 1045 ntBASIC25.77■■□□□ 1.72
RTL1A6NKG5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.77■■□□□ 1.72
RTL1A6NKG5 AL121956.5-201ENST00000625261 221 ntBASIC25.77■■□□□ 1.72
RTL1A6NKG5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL1A6NKG5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTL1A6NKG5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.72
RTL1A6NKG5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.76■■□□□ 1.71
RTL1A6NKG5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC25.76■■□□□ 1.71
RTL1A6NKG5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.76■■□□□ 1.71
RTL1A6NKG5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.76■■□□□ 1.71
RTL1A6NKG5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 AL023973.1-201ENST00000624619 620 ntBASIC25.76■■□□□ 1.71
RTL1A6NKG5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL1A6NKG5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 AL031432.5-201ENST00000641059 760 ntBASIC25.75■■□□□ 1.71
RTL1A6NKG5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL1A6NKG5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL1A6NKG5 KRT8P45-201ENST00000414328 1447 ntBASIC25.74■■□□□ 1.71
RTL1A6NKG5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL1A6NKG5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 UPK3BP1-201ENST00000428678 509 ntBASIC25.74■■□□□ 1.71
RTL1A6NKG5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.74■■□□□ 1.71
RTL1A6NKG5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL1A6NKG5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL1A6NKG5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL1A6NKG5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
RTL1A6NKG5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.73■■□□□ 1.71
RTL1A6NKG5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.73■■□□□ 1.71
RTL1A6NKG5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC25.73■■□□□ 1.71
RTL1A6NKG5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.73■■□□□ 1.71
RTL1A6NKG5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RTL1A6NKG5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL1A6NKG5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 AP000523.1-201ENST00000398242 1049 ntBASIC25.72■■□□□ 1.71
RTL1A6NKG5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTL1A6NKG5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 NEK4P2-201ENST00000580004 1012 ntBASIC25.72■■□□□ 1.71
RTL1A6NKG5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL1A6NKG5 AP000550.4-202ENST00000639755 178 ntBASIC25.72■■□□□ 1.71
RTL1A6NKG5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL1A6NKG5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL1A6NKG5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL1A6NKG5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RTL1A6NKG5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms