Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 AC087633.2-202ENST00000565166 1439 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 CCDC92B-201ENST00000575506 885 ntBASIC13.78□□□□□ -0.2
LINC01549A6NIU2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.78□□□□□ -0.2
LINC01549A6NIU2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01549A6NIU2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
LINC01549A6NIU2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC01549A6NIU2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LINC01549A6NIU2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 HLA-G-202ENST00000376815 851 ntBASIC13.77□□□□□ -0.21
LINC01549A6NIU2 HLA-G-203ENST00000376818 1127 ntBASIC13.77□□□□□ -0.21
LINC01549A6NIU2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.77□□□□□ -0.21
LINC01549A6NIU2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01549A6NIU2 AC009113.1-201ENST00000570267 2443 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms