Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 AC005829.2-201ENST00000571422 1056 ntBASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00959A0A1B0GUT2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 AC141586.3-201ENST00000562166 1838 ntBASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 AC073111.5-205ENST00000641717 521 ntBASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00959A0A1B0GUT2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00959A0A1B0GUT2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 AL161938.1-201ENST00000569833 2180 ntBASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ZNF815P-204ENST00000434898 1737 ntBASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00959A0A1B0GUT2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00959A0A1B0GUT2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms