Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CD177P1-201ENST00000606252 935 ntBASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 MIR4785-201ENST00000585005 73 ntBASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 AC113410.3-201ENST00000623366 203 ntBASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 HLA-A-209ENST00000638375 975 ntBASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV25A0A0B4J276 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV25A0A0B4J276 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV25A0A0B4J276 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV25A0A0B4J276 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV25A0A0B4J276 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV25A0A0B4J276 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 AL355355.2-201ENST00000442321 338 ntBASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 AL160286.2-201ENST00000567150 934 ntBASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 MIR4497-201ENST00000583208 89 ntBASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 CR392000.1-201ENST00000624770 1228 ntBASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV25A0A0B4J276 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms