Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 Z82202.1-201ENST00000623446 1880 ntBASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 AL032819.2-201ENST00000624543 2162 ntBASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 AC091874.3-201ENST00000512672 1195 ntBASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 MIR4758-201ENST00000577688 71 ntBASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-3A0A0B4J271 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 NCF1B-203ENST00000435988 1254 ntBASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-3A0A0B4J271 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 TSPY6P-201ENST00000448518 926 ntBASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 AC097658.1-201ENST00000475555 843 ntBASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms