Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 KRT16P3-201ENST00000439127 1283 ntBASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 AC067852.2-201ENST00000590513 2313 ntBASIC13.61□□□□□ -0.23
TRAV12-1A0A0B4J245 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 AL358852.1-201ENST00000623174 1268 ntBASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV12-1A0A0B4J245 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 OR6D1P-202ENST00000641007 5290 ntBASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV12-1A0A0B4J245 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms