Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 MIR192-201ENST00000384915 110 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 ANAPC10P1-201ENST00000395991 556 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 RPS4XP9-201ENST00000405151 780 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 ETF1P3-201ENST00000430422 1160 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 MTCYBP15-201ENST00000433123 1127 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AL357520.1-201ENST00000441557 453 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AL031313.1-201ENST00000448435 256 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 GYG1P1-201ENST00000460864 698 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 RPS4XP6-201ENST00000477670 797 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 METTL15P1-201ENST00000481421 1045 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 PGBD4P4-201ENST00000509673 613 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 RN7SKP265-201ENST00000516448 223 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AF186190.1-201ENST00000517470 480 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 NPM1P6-201ENST00000521088 871 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC011611.5-201ENST00000552477 578 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AL132857.1-201ENST00000555180 708 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCNKAP51800 ZNF971P-201ENST00000562068 1249 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC098935.2-201ENST00000604222 466 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 Z82195.1-201ENST00000604558 398 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC073387.2-201ENST00000604797 784 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 RNU4-5P-201ENST00000607255 135 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 AC090948.2-201ENST00000607363 564 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC087683.2-201ENST00000611384 326 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 BMS1P21-201ENST00000634565 365 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 LINC01109-201ENST00000603837 3081 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLCNKAP51800 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCNKAP51800 ZNF849P-201ENST00000594711 1566 ntBASIC4.7□□□□□ -1.66
CLCNKAP51800 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.69□□□□□ -1.66
CLCNKAP51800 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCNKAP51800 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCNKAP51800 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCNKAP51800 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLCNKAP51800 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCNKAP51800 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCNKAP51800 RNU6-452P-201ENST00000384406 107 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 HMGB3P18-201ENST00000406327 590 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AL449283.1-202ENST00000418249 604 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 NANOGP5-201ENST00000424456 877 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 OSTCP5-201ENST00000425293 453 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 MTCO1P52-201ENST00000433928 531 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC016831.4-201ENST00000438302 307 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.69□□□□□ -1.66
CLCNKAP51800 GTF2IP12-201ENST00000456547 356 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AL139824.2-201ENST00000458731 1095 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC010326.1-201ENST00000462726 602 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AL591473.1-201ENST00000464297 313 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC093752.1-206ENST00000511823 336 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 HMGB1P19-201ENST00000517578 577 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCNKAP51800 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC137768.1-201ENST00000549998 553 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC068446.3-201ENST00000555285 382 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.69□□□□□ -1.66
CLCNKAP51800 AC093249.4-201ENST00000564755 259 ntBASIC4.69□□□□□ -1.66
CLCNKAP51800 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms