RNA–Protein interactions for RNA: ENST00000535704.1

AP000462.1-201, humanhuman

TSL 3 BASIC

Gene AP000462.1, Length 818 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000462.1-201ENST00000535704 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
AP000462.1-201ENST00000535704 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
AP000462.1-201ENST00000535704 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
AP000462.1-201ENST00000535704 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
AP000462.1-201ENST00000535704 FOXD1Q16676 465 aa26.16■■□□□ 1.78
AP000462.1-201ENST00000535704 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
AP000462.1-201ENST00000535704 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
AP000462.1-201ENST00000535704 ADRA2BP18089 450 aa24.47■■□□□ 1.51
AP000462.1-201ENST00000535704 PIAS4Q8N2W9 510 aaPredicted RBP24.47■■□□□ 1.51
AP000462.1-201ENST00000535704 MSH5O43196 834 aa24.43■■□□□ 1.5
AP000462.1-201ENST00000535704 POTEDQ86YR6 584 aa24.05■■□□□ 1.44
AP000462.1-201ENST00000535704 MAPK8IP2Q13387 824 aaPredicted RBP22.45■■□□□ 1.18
AP000462.1-201ENST00000535704 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
AP000462.1-201ENST00000535704 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
AP000462.1-201ENST00000535704 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
AP000462.1-201ENST00000535704 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
AP000462.1-201ENST00000535704 HOXD11P31277 338 aaPredicted RBP21.48■■□□□ 1.03
AP000462.1-201ENST00000535704 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
AP000462.1-201ENST00000535704 RNF216Q9NWF9 866 aaPredicted RBP21.35■■□□□ 1.01
AP000462.1-201ENST00000535704 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
AP000462.1-201ENST00000535704 CACNB1Q02641 598 aaPredicted RBP20.92■□□□□ 0.94
AP000462.1-201ENST00000535704 NPM3O75607 178 aaKnown RBP20.9■□□□□ 0.94
AP000462.1-201ENST00000535704 RNF39Q9H2S5 420 aa20.86■□□□□ 0.93
AP000462.1-201ENST00000535704 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
AP000462.1-201ENST00000535704 KCNA4P22459 653 aa20.59■□□□□ 0.89
AP000462.1-201ENST00000535704 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
AP000462.1-201ENST00000535704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.87
AP000462.1-201ENST00000535704 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
AP000462.1-201ENST00000535704 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
AP000462.1-201ENST00000535704 SPINK5Q9NQ38 1064 aaPredicted RBP19.77■□□□□ 0.76
AP000462.1-201ENST00000535704 CAPN15O75808 1086 aa19.72■□□□□ 0.75
AP000462.1-201ENST00000535704 DSG3P32926 999 aa19.58■□□□□ 0.72
AP000462.1-201ENST00000535704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
AP000462.1-201ENST00000535704 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
AP000462.1-201ENST00000535704 APLP2Q06481 763 aa19.48■□□□□ 0.71
AP000462.1-201ENST00000535704 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
AP000462.1-201ENST00000535704 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
AP000462.1-201ENST00000535704 SAMD1Q6SPF0 538 aaPredicted RBP19.4■□□□□ 0.7
AP000462.1-201ENST00000535704 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
AP000462.1-201ENST00000535704 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
AP000462.1-201ENST00000535704 ABCB7O75027 752 aa19.29■□□□□ 0.68
AP000462.1-201ENST00000535704 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
AP000462.1-201ENST00000535704 ZBTB22O15209 634 aa18.94■□□□□ 0.62
AP000462.1-201ENST00000535704 POLA2Q14181 598 aa18.91■□□□□ 0.62
AP000462.1-201ENST00000535704 ATF5Q9Y2D1 282 aaPredicted RBP18.89■□□□□ 0.61
AP000462.1-201ENST00000535704 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
AP000462.1-201ENST00000535704 POTEHQ6S545 545 aa18.6■□□□□ 0.57
AP000462.1-201ENST00000535704 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
AP000462.1-201ENST00000535704 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
AP000462.1-201ENST00000535704 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
AP000462.1-201ENST00000535704 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
AP000462.1-201ENST00000535704 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
AP000462.1-201ENST00000535704 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
AP000462.1-201ENST00000535704 FBLN2P98095 1184 aa18.12■□□□□ 0.49
AP000462.1-201ENST00000535704 REM2Q8IYK8 340 aaPredicted RBP18.09■□□□□ 0.49
AP000462.1-201ENST00000535704 MKRN4PQ13434 485 aaPredicted RBP18.02■□□□□ 0.48
AP000462.1-201ENST00000535704 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
AP000462.1-201ENST00000535704 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
AP000462.1-201ENST00000535704 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
AP000462.1-201ENST00000535704 SPDYE2Q495Y8 402 aa17.97■□□□□ 0.47
AP000462.1-201ENST00000535704 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
AP000462.1-201ENST00000535704 PIP4P2Q8N4L2 257 aa17.82■□□□□ 0.44
AP000462.1-201ENST00000535704 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
AP000462.1-201ENST00000535704 SSUH2Q9Y2M2 353 aa17.75■□□□□ 0.43
AP000462.1-201ENST00000535704 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
AP000462.1-201ENST00000535704 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
AP000462.1-201ENST00000535704 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
AP000462.1-201ENST00000535704 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
AP000462.1-201ENST00000535704 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
AP000462.1-201ENST00000535704 HAX1O00165 279 aa17.46■□□□□ 0.39
AP000462.1-201ENST00000535704 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
AP000462.1-201ENST00000535704 PRR29P0C7W0 189 aa17.33■□□□□ 0.36
AP000462.1-201ENST00000535704 CHADLQ6NUI6 762 aa17.29■□□□□ 0.36
AP000462.1-201ENST00000535704 EVX2Q03828 476 aa17.27■□□□□ 0.36
AP000462.1-201ENST00000535704 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
AP000462.1-201ENST00000535704 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
AP000462.1-201ENST00000535704 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
AP000462.1-201ENST00000535704 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
AP000462.1-201ENST00000535704 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
AP000462.1-201ENST00000535704 CD44P16070 742 aaKnown RBP16.9■□□□□ 0.3
AP000462.1-201ENST00000535704 GABBR2O75899 941 aa16.88■□□□□ 0.29
AP000462.1-201ENST00000535704 PROM2Q8N271 834 aa16.8■□□□□ 0.28
AP000462.1-201ENST00000535704 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
AP000462.1-201ENST00000535704 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
AP000462.1-201ENST00000535704 ZNF579Q8NAF0 562 aaKnown RBP16.63■□□□□ 0.25
AP000462.1-201ENST00000535704 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP000462.1-201ENST00000535704 CLCN6P51797 869 aa16.59■□□□□ 0.25
AP000462.1-201ENST00000535704 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
AP000462.1-201ENST00000535704 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
AP000462.1-201ENST00000535704 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
AP000462.1-201ENST00000535704 FKBP8Q14318 412 aa16.46■□□□□ 0.23
AP000462.1-201ENST00000535704 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
AP000462.1-201ENST00000535704 DCBLD2Q96PD2 775 aa16.44■□□□□ 0.22
AP000462.1-201ENST00000535704 MIER1Q8N108 512 aa16.4■□□□□ 0.22
AP000462.1-201ENST00000535704 LHX8Q68G74 356 aa16.39■□□□□ 0.21
AP000462.1-201ENST00000535704 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
AP000462.1-201ENST00000535704 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
AP000462.1-201ENST00000535704 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
AP000462.1-201ENST00000535704 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
AP000462.1-201ENST00000535704 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms